STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ71077.1Sel1 repeat-containing protein. (193 aa)    
Predicted Functional Partners:
SDY69471.1
ATPase family associated with various cellular activities (AAA).
   
 0.828
SDZ72232.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
   
 0.828
SDZ71078.1
Hypothetical protein.
       0.773
SDY11321.1
Hypothetical chaperone protein.
   
 0.729
SDY65251.1
Molecular chaperone HscC.
   
 0.729
SDZ45552.1
Chaperone protein HscA.
   
 0.729
SDZ53002.1
Molecular chaperone DnaK.
   
 0.729
SDY77861.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
 
  0.683
SDZ71076.1
Hypothetical protein.
       0.651
SDY39027.1
Acyltransferase.
    
  0.631
Your Current Organism:
Variovorax sp. YR266
NCBI taxonomy Id: 1884386
Other names: V. sp. YR266
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.