STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG06034.1Cu+-exporting ATPase. (792 aa)    
Predicted Functional Partners:
SMG05995.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.875
SMG05990.1
Cytochrome c oxidase cbb3-type subunit 3.
 
     0.836
SMG06004.1
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.823
SMG05987.1
Cytochrome c oxidase accessory protein FixG.
 
  
 0.805
SMG05984.1
Nitrogen fixation protein FixH.
 
   
 0.798
SMG05971.1
Hypothetical protein.
 
   
 0.795
SMG06039.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
     0.746
SMG48666.1
Cu2+-exporting ATPase.
 
 
0.732
SMG50085.1
Cu2+-exporting ATPase.
 
 
0.726
SMG48609.1
Cu2+-exporting ATPase.
 
 
0.725
Your Current Organism:
Arenibacter troitsensis
NCBI taxonomy Id: 188872
Other names: A. troitsensis, Arenibacter trinitatis, Arenibacter troitsensis Nedashkovskaya et al. 2003, DSM 19835, JCM 11736, KMM 3674, NBRC 101532
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