STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK22280.1ATP-dependent DNA helicase RecG. (471 aa)    
Predicted Functional Partners:
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
       0.655
SEL13292.1
Outer membrane immunogenic protein.
   
    0.574
SEL13790.1
Outer membrane immunogenic protein.
   
    0.574
SEK22355.1
Putative zinc-or iron-chelating domain-containing protein.
       0.514
SEL24851.1
HTH domain-containing protein.
  
 
  0.489
SEK75719.1
Hypothetical protein.
   
    0.432
SEL81515.1
Nucleotidyl transferase AbiEii toxin, Type IV TA system.
 
     0.420
SEL18408.1
ATP-binding cassette, subfamily F, uup.
  
     0.406
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
Server load: low (18%) [HD]