STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL75495.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
SEL75545.1
Methyltransferase domain-containing protein.
 
     0.872
SEL75518.1
Hypothetical protein.
       0.794
SEL75676.1
Chromosome partitioning protein, ParB family.
 
     0.722
SEL77560.1
Hypothetical protein.
  
     0.703
SEL77587.1
Hypothetical protein.
  
     0.693
SEL75703.1
Protein of unknown function.
 
     0.591
SEL75275.1
Protein of unknown function.
  
     0.578
SEL75574.1
Addiction module toxin, RelE/StbE family.
 
     0.544
SEL75470.1
Hypothetical protein.
       0.529
SEL75889.1
Replication initiation protein RepC.
  
     0.525
Your Current Organism:
Jannaschia helgolandensis
NCBI taxonomy Id: 188906
Other names: DSM 14858, J. helgolandensis, Jannaschia helgolandensis Wagner-Dobler et al. 2003, NCIMB 13941, strain Hel 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.