STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_02416Uncharacterized protein. (789 aa)    
Predicted Functional Partners:
PROFUN_05191
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.995
PROFUN_10375
Oligomeric Golgi complex subunit 8-like.
    
 0.992
PROFUN_14386
Oligomeric Golgi complex subunit 1-like.
   
 0.986
PROFUN_08060
Uncharacterized protein.
   
 0.986
PROFUN_12490
Oligomeric Golgi complex subunit 7-like.
    
 0.984
PROFUN_05933
Cog4 domain-containing protein.
    
 0.972
PROFUN_04800
Oligomeric Golgi complex subunit 4-like.
    
 0.972
PROFUN_03701
Component of oligomeric golgi complex 2-like.
   
 0.960
PROFUN_03648
Component of oligomeric golgi complex 2-like.
   
 0.960
PROFUN_08353
Uncharacterized protein.
    
 0.839
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.