STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROFUN_00130Ookinete protein. (1152 aa)    
Predicted Functional Partners:
PROFUN_07436
Polyadenylate-binding protein 2-like.
   
 0.816
PROFUN_09028
Uncharacterized protein.
   
 0.793
PROFUN_09603
SH3 domain-containing protein.
   
  0.792
PROFUN_06148
Putative RNA binding protein.
   
 0.780
PROFUN_02242
Pre-mRNA-processing factor 17-like.
   
 0.776
PROFUN_01266
WD repeat-containing protein 25-like.
   
 0.776
PROFUN_08808
Pre-mRNA-processing factor 19-like.
   
 0.755
PROFUN_13814
C2H2-type domain-containing protein.
   
 0.749
PROFUN_02888
PWI domain-containing protein.
   
 0.748
PROFUN_08587
Small nucleolar ribonucleoprotein complex subunit Utp14.
   
 0.742
Your Current Organism:
Planoprotostelium fungivorum
NCBI taxonomy Id: 1890364
Other names: P. fungivorum, Planoprotostelium fungivorum Hillmann, Ferling, Novohradska & Gloeckner 2017, Protostelium sp. Jena Gg-2016a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.