STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ92873.1Hypothetical protein. (309 aa)    
Predicted Functional Partners:
APZ92872.1
Hypothetical protein.
  
 0.993
yphA
Inner membrane protein YphA.
  
  
 0.698
APZ96316.1
ATPase involved in DNA repair.
  
     0.692
APZ96327.1
Hypothetical protein; Aerotolerance regulator N-terminal.
  
     0.584
APZ96291.1
Hypothetical protein.
  
     0.583
APZ96773.1
Hypothetical protein.
 
  
 0.561
APZ90809.1
Calcineurin-like phosphoesterase.
  
     0.548
wapA_3
Cell wall-associated polypeptide.
  
    0.530
APZ92871.1
Hypothetical protein.
       0.527
APZ93585.1
Alpha/beta hydrolase family protein.
  
     0.527
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.