STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ92993.1Hypothetical protein. (476 aa)    
Predicted Functional Partners:
rhgT
Rhamnogalacturonan acetylesterase RhgT.
  
 
   0.740
APZ94255.1
Hypothetical protein.
 
   
 0.715
APZ90753.1
Hypothetical protein.
  
 
   0.671
abn-ts
Intracellular endo-alpha-(1->5)-L-arabinanase.
 
 
 0.667
APZ91667.1
Hypothetical protein.
  
 
   0.660
xynB
Endo-1,4-beta-xylanase B.
 
 
 
 0.655
APZ92994.1
Zinc carboxypeptidase.
       0.581
APZ90838.1
Glyoxalase-like domain protein.
  
     0.577
APZ93127.1
Stress responsive A/B Barrel Domain protein.
  
     0.574
APZ95416.1
Putative membrane-bound dehydrogenase domain protein.
  
 
   0.515
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.