STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlhH_4Carboxylesterase NlhH. (669 aa)    
Predicted Functional Partners:
nlhH_3
Carboxylesterase NlhH.
  
    0.751
axeA_2
Acetylxylan esterase precursor.
  
    0.657
ctaC
Cytochrome c oxidase subunit 2 precursor.
    
   0.639
APZ95895.1
Hypothetical protein.
       0.598
fusA_1
Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
   
  0.585
fusA_2
Elongation factor G 1.
   
  0.585
aes
Acetyl esterase.
 
  
0.547
APZ95894.1
Hypothetical protein.
       0.507
APZ95897.1
Bacillithiol biosynthesis deacetylase.
       0.505
aas
Bifunctional protein aas.
  
 
 0.504
Your Current Organism:
Fuerstia marisgermanicae
NCBI taxonomy Id: 1891926
Other names: DSM 27554, F. marisgermanicae, LMG 27831, LMG:27831, Planctomycetes bacterium NH11, strain NH11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.