STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001719615_00041Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_001719615_00050
Unannotated protein.
 
  
  0.964
GCA_001719615_00539
Unannotated protein.
 
 
  0.942
GCA_001719615_03226
Unannotated protein.
 
  
 0.857
GCA_001719615_00038
Unannotated protein.
 
    0.843
GCA_001719615_00042
Unannotated protein.
 
     0.769
GCA_001719615_00319
Unannotated protein.
  
  
  0.750
GCA_001719615_00538
Unannotated protein.
 
    0.665
GCA_001719615_01460
Unannotated protein.
     
 0.449
GCA_001719615_01479
Unannotated protein.
   
    0.410
Your Current Organism:
Neptunicoccus sediminis
NCBI taxonomy Id: 1892596
Other names: CCTCC AB 2015430, CCTCC:AB:2015430, KCTC 42985, MCCC 1K03518, N. sediminis, NBRC 111872, Rhodobacteraceae bacterium CY02, strain CY02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.