STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001719615_02294Unannotated protein. (189 aa)    
Predicted Functional Partners:
GCA_001719615_02293
Unannotated protein.
  
  0.934
GCA_001719615_02295
Unannotated protein.
 
  
  0.918
GCA_001719615_02292
Unannotated protein.
 
     0.857
GCA_001719615_02290
Unannotated protein.
 
     0.829
GCA_001719615_02289
Unannotated protein.
  
    0.756
GCA_001719615_02291
Unannotated protein.
  
    0.755
GCA_001719615_02391
Unannotated protein.
 
 
  0.677
GCA_001719615_02296
Unannotated protein.
 
     0.666
GCA_001719615_03117
Unannotated protein.
  
  
  0.621
GCA_001719615_02906
Unannotated protein.
  
  
  0.610
Your Current Organism:
Neptunicoccus sediminis
NCBI taxonomy Id: 1892596
Other names: CCTCC AB 2015430, CCTCC:AB:2015430, KCTC 42985, MCCC 1K03518, N. sediminis, NBRC 111872, Rhodobacteraceae bacterium CY02, strain CY02
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