STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900117425_02746Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_900117425_02747
Unannotated protein.
       0.675
GCA_900117425_00857
Unannotated protein.
    
  0.628
GCA_900117425_03075
Unannotated protein.
  
     0.602
GCA_900117425_02748
Unannotated protein.
 
     0.564
GCA_900117425_03505
Unannotated protein.
  
     0.537
GCA_900117425_01733
Unannotated protein.
  
     0.532
GCA_900117425_01518
Unannotated protein.
  
     0.468
GCA_900117425_01509
Unannotated protein.
  
     0.455
GCA_900117425_01513
Unannotated protein.
  
     0.448
GCA_900117425_01276
Unannotated protein.
  
  
  0.430
Your Current Organism:
Novosphingobium sp. NDB2Meth1
NCBI taxonomy Id: 1892847
Other names: N. sp. NDB2Meth1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.