STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922955_00721Unannotated protein. (180 aa)    
Predicted Functional Partners:
GCA_001922955_01747
Unannotated protein.
 
  
 0.853
GCA_001922955_01749
Unannotated protein.
    
 0.833
GCA_001922955_02060
Unannotated protein.
    
 0.778
GCA_001922955_03400
Unannotated protein.
  
     0.760
GCA_001922955_00722
Unannotated protein.
       0.757
GCA_001922955_03664
Unannotated protein.
    
 0.740
GCA_001922955_00273
Unannotated protein.
 
 
 0.724
GCA_001922955_03398
Unannotated protein.
  
     0.670
GCA_001922955_00425
Unannotated protein.
  
     0.659
GCA_001922955_00424
Unannotated protein.
  
     0.637
Your Current Organism:
Alteromonadales bacterium BS08
NCBI taxonomy Id: 1895005
Other names: A. bacterium BS08
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.