STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbUSerine phosphatase RsbU. (460 aa)    
Predicted Functional Partners:
spoIIAA-4
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.866
spoIIAA-3
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.857
LA_1195
Hypothetical protein.
       0.856
LA_1198
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.856
spoIIAA
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.848
LA_3070
Anti-sigma-factor antagonist.
  
   0.828
LA_0653
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.780
LA_0289
Adenylate/guanylate cyclase.
  
  
 0.736
LA_1196
Hypothetical protein.
       0.736
LA_3884
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.731
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.