Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_0376 | LA_1715 | LA_0376 | LA_1715 | Hypothetical protein. | Hypothetical protein. | 0.528 |
LA_0376 | eno | LA_0376 | LA_1951 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.838 |
LA_0376 | gapA | LA_0376 | LA_1704 | Hypothetical protein. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.528 |
LA_0376 | pgk | LA_0376 | LA_1703 | Hypothetical protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.810 |
LA_0376 | tpiA | LA_0376 | LA_1696 | Hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.802 |
LA_1715 | LA_0376 | LA_1715 | LA_0376 | Hypothetical protein. | Hypothetical protein. | 0.528 |
LA_1715 | eno | LA_1715 | LA_1951 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.892 |
LA_1715 | gpmI | LA_1715 | LA_0439 | Hypothetical protein. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.528 |
LA_1715 | pfkA | LA_1715 | LB_111 | Hypothetical protein. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. | 0.622 |
LA_1715 | pgi | LA_1715 | LA_3888 | Hypothetical protein. | Glucose-6-phosphate isomerase. | 0.776 |
LA_1715 | pgk | LA_1715 | LA_1703 | Hypothetical protein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.892 |
LA_1715 | pykF | LA_1715 | LA_2924 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.751 |
LA_1715 | pykF-2 | LA_1715 | LB_353 | Hypothetical protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.751 |
LA_1715 | tpiA | LA_1715 | LA_1696 | Hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.896 |
eno | LA_0376 | LA_1951 | LA_0376 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Hypothetical protein. | 0.838 |
eno | LA_1715 | LA_1951 | LA_1715 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Hypothetical protein. | 0.892 |
eno | gapA | LA_1951 | LA_1704 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.937 |
eno | gpmI | LA_1951 | LA_0439 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.983 |
eno | pfkA | LA_1951 | LB_111 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. | 0.893 |
eno | pgi | LA_1951 | LA_3888 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Glucose-6-phosphate isomerase. | 0.981 |
page 1 of 5