Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_1214 | cheA | LA_1214 | LA_1251 | Putative methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase CheA. | 0.992 |
LA_1214 | cheA-2 | LA_1214 | LA_2425 | Putative methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase CheA. | 0.983 |
LA_1214 | cheB-3 | LA_1214 | LA_2429 | Putative methyl-accepting chemotaxis protein. | Chemotaxis-specific methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.943 |
LA_1214 | cheD | LA_1214 | LA_2428 | Putative methyl-accepting chemotaxis protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.970 |
LA_1214 | cheW-3 | LA_1214 | LA_2427 | Putative methyl-accepting chemotaxis protein. | Chemotaxis protein CheW. | 0.980 |
LA_2246 | cheA | LA_2246 | LA_1251 | Methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase CheA. | 0.992 |
LA_2246 | cheA-2 | LA_2246 | LA_2425 | Methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase CheA. | 0.983 |
LA_2246 | cheB-3 | LA_2246 | LA_2429 | Methyl-accepting chemotaxis protein. | Chemotaxis-specific methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.940 |
LA_2246 | cheD | LA_2246 | LA_2428 | Methyl-accepting chemotaxis protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.966 |
LA_2246 | cheW-3 | LA_2246 | LA_2427 | Methyl-accepting chemotaxis protein. | Chemotaxis protein CheW. | 0.979 |
LA_2426 | cheA | LA_2426 | LA_1251 | Methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase CheA. | 0.996 |
LA_2426 | cheA-2 | LA_2426 | LA_2425 | Methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase CheA. | 0.998 |
LA_2426 | cheB-3 | LA_2426 | LA_2429 | Methyl-accepting chemotaxis protein. | Chemotaxis-specific methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.995 |
LA_2426 | cheD | LA_2426 | LA_2428 | Methyl-accepting chemotaxis protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.996 |
LA_2426 | cheW-3 | LA_2426 | LA_2427 | Methyl-accepting chemotaxis protein. | Chemotaxis protein CheW. | 0.999 |
LA_2574 | cheA | LA_2574 | LA_1251 | Putative methyl-accepting chemotaxis transmembrane protein. | Chemotaxis protein histidine kinase CheA. | 0.992 |
LA_2574 | cheA-2 | LA_2574 | LA_2425 | Putative methyl-accepting chemotaxis transmembrane protein. | Chemotaxis protein histidine kinase CheA. | 0.983 |
LA_2574 | cheB-3 | LA_2574 | LA_2429 | Putative methyl-accepting chemotaxis transmembrane protein. | Chemotaxis-specific methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.941 |
LA_2574 | cheD | LA_2574 | LA_2428 | Putative methyl-accepting chemotaxis transmembrane protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.967 |
LA_2574 | cheW-3 | LA_2574 | LA_2427 | Putative methyl-accepting chemotaxis transmembrane protein. | Chemotaxis protein CheW. | 0.980 |
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