STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LA_2548Serine/threonine phosphatase containing a PAS domain. (418 aa)    
Predicted Functional Partners:
spoIIAA-4
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.861
spoIIAA-3
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.860
spoIIAA
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.845
LA_2546
Capsule biosynthesis protein.
 
     0.838
LA_2547
Capsule biosynthesis protein.
 
     0.815
LA_2545
Hypothetical protein.
       0.814
LA_3070
Anti-sigma-factor antagonist.
  
   0.799
baeS-2
Signal transduction histidine kinase.
 
  
 0.761
LA_0653
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.757
LA_0289
Adenylate/guanylate cyclase.
  
  
 0.736
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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