Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_1745 | LA_2541 | LA_1745 | LA_2541 | Histidine kinase and response regulator hybrid protein. | Histidine kinase response regulator hybrid protein. | 0.997 |
LA_1745 | LA_3894 | LA_1745 | LA_3894 | Histidine kinase and response regulator hybrid protein. | Histidine kinase and response regulator hybrid protein. | 0.997 |
LA_1745 | LA_4008 | LA_1745 | LA_4008 | Histidine kinase and response regulator hybrid protein. | Adenylate/guanylate cyclase. | 0.639 |
LA_1745 | cyaA-6 | LA_1745 | LA_2834 | Histidine kinase and response regulator hybrid protein. | Adenylate/guanylate cyclase. | 0.797 |
LA_1745 | ribB | LA_1745 | LA_1147 | Histidine kinase and response regulator hybrid protein. | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.546 |
LA_1745 | spoT | LA_1745 | LA_3085 | Histidine kinase and response regulator hybrid protein. | Guanosine polyphosphate pyrophosphohydrolase/synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.498 |
LA_2541 | LA_1745 | LA_2541 | LA_1745 | Histidine kinase response regulator hybrid protein. | Histidine kinase and response regulator hybrid protein. | 0.997 |
LA_2541 | LA_3894 | LA_2541 | LA_3894 | Histidine kinase response regulator hybrid protein. | Histidine kinase and response regulator hybrid protein. | 0.995 |
LA_2541 | LA_4008 | LA_2541 | LA_4008 | Histidine kinase response regulator hybrid protein. | Adenylate/guanylate cyclase. | 0.417 |
LA_2541 | cyaA-6 | LA_2541 | LA_2834 | Histidine kinase response regulator hybrid protein. | Adenylate/guanylate cyclase. | 0.799 |
LA_2541 | ribB | LA_2541 | LA_1147 | Histidine kinase response regulator hybrid protein. | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.441 |
LA_2835 | LA_2836 | LA_2835 | LA_2836 | Hypothetical protein. | Hypothetical protein. | 0.814 |
LA_2835 | LA_3894 | LA_2835 | LA_3894 | Hypothetical protein. | Histidine kinase and response regulator hybrid protein. | 0.470 |
LA_2835 | cyaA-6 | LA_2835 | LA_2834 | Hypothetical protein. | Adenylate/guanylate cyclase. | 0.957 |
LA_2836 | LA_2835 | LA_2836 | LA_2835 | Hypothetical protein. | Hypothetical protein. | 0.814 |
LA_2836 | cyaA-6 | LA_2836 | LA_2834 | Hypothetical protein. | Adenylate/guanylate cyclase. | 0.814 |
LA_2836 | folE | LA_2836 | LA_4255 | Hypothetical protein. | GTP cyclohydrolase I. | 0.684 |
LA_3894 | LA_1745 | LA_3894 | LA_1745 | Histidine kinase and response regulator hybrid protein. | Histidine kinase and response regulator hybrid protein. | 0.997 |
LA_3894 | LA_2541 | LA_3894 | LA_2541 | Histidine kinase and response regulator hybrid protein. | Histidine kinase response regulator hybrid protein. | 0.995 |
LA_3894 | LA_2835 | LA_3894 | LA_2835 | Histidine kinase and response regulator hybrid protein. | Hypothetical protein. | 0.470 |
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