Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_2952 | LA_2953 | LA_2952 | LA_2953 | Hypothetical protein. | Polysaccharide biosynthesis protein. | 0.856 |
LA_2952 | LA_2954 | LA_2952 | LA_2954 | Hypothetical protein. | Membrane associated acid phosphatase. | 0.788 |
LA_2952 | icmF | LA_2952 | LA_2956 | Hypothetical protein. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.402 |
LA_2952 | plsC | LA_2952 | LA_2955 | Hypothetical protein. | Acyltransferase. | 0.555 |
LA_2953 | LA_2952 | LA_2953 | LA_2952 | Polysaccharide biosynthesis protein. | Hypothetical protein. | 0.856 |
LA_2953 | LA_2954 | LA_2953 | LA_2954 | Polysaccharide biosynthesis protein. | Membrane associated acid phosphatase. | 0.855 |
LA_2953 | icmF | LA_2953 | LA_2956 | Polysaccharide biosynthesis protein. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.528 |
LA_2953 | plsC | LA_2953 | LA_2955 | Polysaccharide biosynthesis protein. | Acyltransferase. | 0.790 |
LA_2954 | LA_2952 | LA_2954 | LA_2952 | Membrane associated acid phosphatase. | Hypothetical protein. | 0.788 |
LA_2954 | LA_2953 | LA_2954 | LA_2953 | Membrane associated acid phosphatase. | Polysaccharide biosynthesis protein. | 0.855 |
LA_2954 | gpsA | LA_2954 | LA_1112 | Membrane associated acid phosphatase. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.424 |
LA_2954 | icmF | LA_2954 | LA_2956 | Membrane associated acid phosphatase. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.509 |
LA_2954 | plsC | LA_2954 | LA_2955 | Membrane associated acid phosphatase. | Acyltransferase. | 0.548 |
LA_2954 | rplF | LA_2954 | LA_0754 | Membrane associated acid phosphatase. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.729 |
gpsA | LA_2954 | LA_1112 | LA_2954 | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Membrane associated acid phosphatase. | 0.424 |
icmF | LA_2952 | LA_2956 | LA_2952 | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | Hypothetical protein. | 0.402 |
icmF | LA_2953 | LA_2956 | LA_2953 | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | Polysaccharide biosynthesis protein. | 0.528 |
icmF | LA_2954 | LA_2956 | LA_2954 | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | Membrane associated acid phosphatase. | 0.509 |
icmF | plsC | LA_2956 | LA_2955 | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | Acyltransferase. | 0.799 |
plsC | LA_2952 | LA_2955 | LA_2952 | Acyltransferase. | Hypothetical protein. | 0.555 |
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