Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LA_0289 | LA_1745 | Adenylate/guanylate cyclase. | Histidine kinase and response regulator hybrid protein. | 0.998 |
LA_0289 | LA_2421 | Adenylate/guanylate cyclase. | Histidine kinase sensor protein. | 0.991 |
LA_0289 | LA_2541 | Adenylate/guanylate cyclase. | Histidine kinase response regulator hybrid protein. | 0.995 |
LA_0289 | LA_2805 | Adenylate/guanylate cyclase. | Histidine kinase sensor protein. | 0.994 |
LA_0289 | LA_2951 | Adenylate/guanylate cyclase. | Two-component hybrid sensor and regulator. | 0.956 |
LA_0289 | LA_3514 | Adenylate/guanylate cyclase. | Serine/threonine phosphatase containing signal receiver domain REC. | 0.983 |
LA_0289 | LA_3662 | Adenylate/guanylate cyclase. | Two-component hybrid sensor and regulator. | 0.993 |
LA_0289 | LA_3858 | Adenylate/guanylate cyclase. | Histidine kinase and response regulator hybrid protein. | 0.998 |
LA_0289 | LA_3996 | Adenylate/guanylate cyclase. | Histidine kinase response regulator hybrid protein. | 0.993 |
LA_0289 | LB_241 | Adenylate/guanylate cyclase. | Histidine kinase sensor protein. | 0.992 |
LA_1745 | LA_0289 | Histidine kinase and response regulator hybrid protein. | Adenylate/guanylate cyclase. | 0.998 |
LA_1745 | LA_2421 | Histidine kinase and response regulator hybrid protein. | Histidine kinase sensor protein. | 0.996 |
LA_1745 | LA_2541 | Histidine kinase and response regulator hybrid protein. | Histidine kinase response regulator hybrid protein. | 0.997 |
LA_1745 | LA_2805 | Histidine kinase and response regulator hybrid protein. | Histidine kinase sensor protein. | 0.996 |
LA_1745 | LA_2951 | Histidine kinase and response regulator hybrid protein. | Two-component hybrid sensor and regulator. | 0.944 |
LA_1745 | LA_3514 | Histidine kinase and response regulator hybrid protein. | Serine/threonine phosphatase containing signal receiver domain REC. | 0.966 |
LA_1745 | LA_3662 | Histidine kinase and response regulator hybrid protein. | Two-component hybrid sensor and regulator. | 0.997 |
LA_1745 | LA_3858 | Histidine kinase and response regulator hybrid protein. | Histidine kinase and response regulator hybrid protein. | 0.998 |
LA_1745 | LA_3996 | Histidine kinase and response regulator hybrid protein. | Histidine kinase response regulator hybrid protein. | 0.997 |
LA_1745 | LB_241 | Histidine kinase and response regulator hybrid protein. | Histidine kinase sensor protein. | 0.997 |
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