Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LA_3969 | apt | LA_3969 | LB_176 | adenosine/AMP deaminase. | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.482 |
| LA_3969 | guaA-2 | LA_3969 | LA_2087 | adenosine/AMP deaminase. | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | 0.579 |
| LA_3969 | mtnP | LA_3969 | LA_4248 | adenosine/AMP deaminase. | Purine nucleoside phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.603 |
| add | apt | LA_3783 | LB_176 | Adenosine deaminase. | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.482 |
| add | guaA-2 | LA_3783 | LA_2087 | Adenosine deaminase. | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | 0.579 |
| add | mtnP | LA_3783 | LA_4248 | Adenosine deaminase. | Purine nucleoside phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.603 |
| apt | LA_3969 | LB_176 | LA_3969 | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | adenosine/AMP deaminase. | 0.482 |
| apt | add | LB_176 | LA_3783 | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Adenosine deaminase. | 0.482 |
| apt | guaA-2 | LB_176 | LA_2087 | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | 0.996 |
| apt | hpt | LB_176 | LA_4295 | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.941 |
| apt | mtnA | LB_176 | LA_2868 | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Translation initiation factor 2B; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.520 |
| apt | mtnB | LB_176 | LB_292 | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Aldolase class 2; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily. | 0.431 |
| apt | mtnP | LB_176 | LA_4248 | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine nucleoside phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.955 |
| guaA-2 | LA_3969 | LA_2087 | LA_3969 | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | adenosine/AMP deaminase. | 0.579 |
| guaA-2 | add | LA_2087 | LA_3783 | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | Adenosine deaminase. | 0.579 |
| guaA-2 | apt | LA_2087 | LB_176 | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.996 |
| guaA-2 | hpt | LA_2087 | LA_4295 | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.949 |
| guaA-2 | mtnP | LA_2087 | LA_4248 | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | Purine nucleoside phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.625 |
| guaA-2 | speE | LA_2087 | LB_311 | Bifunctional GMP synthase/glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.499 |
| hpt | apt | LA_4295 | LB_176 | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.941 |
page 1 of 3