Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_0332 | LA_2749 | LA_0332 | LA_2749 | 6-pyruvoyltetrahydropterin synthase. | 6-pyruvoyl-tetrahydropterin synthase. | 0.924 |
LA_0332 | LA_4246 | LA_0332 | LA_4246 | 6-pyruvoyltetrahydropterin synthase. | Alkaline phosphatase. | 0.900 |
LA_0332 | folE | LA_0332 | LA_4255 | 6-pyruvoyltetrahydropterin synthase. | GTP cyclohydrolase I. | 0.972 |
LA_0332 | queE | LA_0332 | LA_4037 | 6-pyruvoyltetrahydropterin synthase. | Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.986 |
LA_2749 | LA_0332 | LA_2749 | LA_0332 | 6-pyruvoyl-tetrahydropterin synthase. | 6-pyruvoyltetrahydropterin synthase. | 0.924 |
LA_2749 | LA_4246 | LA_2749 | LA_4246 | 6-pyruvoyl-tetrahydropterin synthase. | Alkaline phosphatase. | 0.900 |
LA_2749 | folE | LA_2749 | LA_4255 | 6-pyruvoyl-tetrahydropterin synthase. | GTP cyclohydrolase I. | 0.972 |
LA_2749 | queE | LA_2749 | LA_4037 | 6-pyruvoyl-tetrahydropterin synthase. | Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.985 |
LA_4246 | LA_0332 | LA_4246 | LA_0332 | Alkaline phosphatase. | 6-pyruvoyltetrahydropterin synthase. | 0.900 |
LA_4246 | LA_2749 | LA_4246 | LA_2749 | Alkaline phosphatase. | 6-pyruvoyl-tetrahydropterin synthase. | 0.900 |
LA_4246 | folE | LA_4246 | LA_4255 | Alkaline phosphatase. | GTP cyclohydrolase I. | 0.935 |
folE | LA_0332 | LA_4255 | LA_0332 | GTP cyclohydrolase I. | 6-pyruvoyltetrahydropterin synthase. | 0.972 |
folE | LA_2749 | LA_4255 | LA_2749 | GTP cyclohydrolase I. | 6-pyruvoyl-tetrahydropterin synthase. | 0.972 |
folE | LA_4246 | LA_4255 | LA_4246 | GTP cyclohydrolase I. | Alkaline phosphatase. | 0.935 |
folE | folK | LA_4255 | LA_3959 | GTP cyclohydrolase I. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. | 0.998 |
folE | folP | LA_4255 | LA_0057 | GTP cyclohydrolase I. | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.995 |
folE | ndk | LA_4255 | LA_4168 | GTP cyclohydrolase I. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.844 |
folE | pykF | LA_4255 | LA_2924 | GTP cyclohydrolase I. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.809 |
folE | pykF-2 | LA_4255 | LB_353 | GTP cyclohydrolase I. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.809 |
folE | queE | LA_4255 | LA_4037 | GTP cyclohydrolase I. | Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.870 |
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