Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_0289 | LA_1745 | LA_0289 | LA_1745 | Adenylate/guanylate cyclase. | Histidine kinase and response regulator hybrid protein. | 0.998 |
LA_0289 | LA_2122 | LA_0289 | LA_2122 | Adenylate/guanylate cyclase. | Sigma factor regulatory protein. | 0.736 |
LA_0289 | LA_2435 | LA_0289 | LA_2435 | Adenylate/guanylate cyclase. | Serine/threonine phosphatase containing GAF domains. | 0.980 |
LA_0289 | LA_3070 | LA_0289 | LA_3070 | Adenylate/guanylate cyclase. | Anti-sigma-factor antagonist. | 0.743 |
LA_0289 | rsbU-3 | LA_0289 | LB_112 | Adenylate/guanylate cyclase. | Serine phosphatase RsbU. | 0.890 |
LA_0289 | rsbW | LA_0289 | LA_2480 | Adenylate/guanylate cyclase. | Anti-sigma factor antagonist. | 0.849 |
LA_0289 | spoIIAA | LA_0289 | LA_0839 | Adenylate/guanylate cyclase. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.743 |
LA_0289 | spoIIAA-3 | LA_0289 | LA_2434 | Adenylate/guanylate cyclase. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.743 |
LA_0289 | spoIIAA-4 | LA_0289 | LA_3096 | Adenylate/guanylate cyclase. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.743 |
LA_1745 | LA_0289 | LA_1745 | LA_0289 | Histidine kinase and response regulator hybrid protein. | Adenylate/guanylate cyclase. | 0.998 |
LA_1745 | LA_2122 | LA_1745 | LA_2122 | Histidine kinase and response regulator hybrid protein. | Sigma factor regulatory protein. | 0.530 |
LA_1745 | LA_2435 | LA_1745 | LA_2435 | Histidine kinase and response regulator hybrid protein. | Serine/threonine phosphatase containing GAF domains. | 0.954 |
LA_1745 | LA_3070 | LA_1745 | LA_3070 | Histidine kinase and response regulator hybrid protein. | Anti-sigma-factor antagonist. | 0.785 |
LA_1745 | rsbU-3 | LA_1745 | LB_112 | Histidine kinase and response regulator hybrid protein. | Serine phosphatase RsbU. | 0.804 |
LA_1745 | rsbW | LA_1745 | LA_2480 | Histidine kinase and response regulator hybrid protein. | Anti-sigma factor antagonist. | 0.824 |
LA_1745 | spoIIAA | LA_1745 | LA_0839 | Histidine kinase and response regulator hybrid protein. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.785 |
LA_1745 | spoIIAA-3 | LA_1745 | LA_2434 | Histidine kinase and response regulator hybrid protein. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.785 |
LA_1745 | spoIIAA-4 | LA_1745 | LA_3096 | Histidine kinase and response regulator hybrid protein. | Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. | 0.785 |
LA_2122 | LA_0289 | LA_2122 | LA_0289 | Sigma factor regulatory protein. | Adenylate/guanylate cyclase. | 0.736 |
LA_2122 | LA_1745 | LA_2122 | LA_1745 | Sigma factor regulatory protein. | Histidine kinase and response regulator hybrid protein. | 0.530 |
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