STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB87606.1Preprotein translocase subunit SecA. (862 aa)    
Predicted Functional Partners:
SKB78242.1
Protein translocase subunit secY/sec61 alpha.
 
 
 0.995
SKB57566.1
Preprotein translocase subunit SecE.
    
 0.985
SKC05906.1
Preprotein translocase subunit SecG.
   
 0.983
SKB51965.1
SecD/SecF fusion protein.
  
 
 0.950
SKB73953.1
Fused signal recognition particle receptor.
  
  
 0.943
SKC09027.1
YidC/Oxa1 family membrane protein insertase.
 
 
 0.942
SKB67098.1
Cell division protein FtsZ.
 
 0.940
SKB47508.1
Protein translocase subunit yajC.
  
  
 0.935
SKB73916.1
Signal recognition particle subunit FFH/SRP54 (srp54).
    
 0.933
SKB74132.1
DNA polymerase I.
 
  
 0.866
Your Current Organism:
Lachnospiraceae bacterium
NCBI taxonomy Id: 1898203
Other names: L. bacterium
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.