STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MK1382Fe-S oxidoreductase. (514 aa)    
Predicted Functional Partners:
MK1381
Glycosyltransferase involved in cell wall biogenesis.
       0.781
MK1377
Predicted nucleic-acid-binding protein containing a Zn-ribbon.
  
    0.589
MK1378
Acetyl-CoA acetyltransferase.
     
 0.580
pksG
3-hydroxy-3-methylglutaryl CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family.
       0.572
MK1380
Predicted transcriptional regulator containing a DNA-binding HTH domain.
       0.572
MK0542
Predicted transcriptional regulator consisting of a V4R domain and a DNA-binding HTH domain.
  
  
 0.547
MK0629
Predicted metabolic regulator containing V4R domain.
  
  
 0.547
MK0630
Predicted metabolic regulator containing V4R domain.
  
  
 0.547
MK0632
Predicted metabolic regulator containing two V4R domains.
  
  
 0.547
MK1107
Predicted metabolic regulator containing two V4R domains.
  
  
 0.547
Your Current Organism:
Methanopyrus kandleri
NCBI taxonomy Id: 190192
Other names: M. kandleri AV19, Methanopyrus kandleri AV19, Methanopyrus kandleri str. AV19
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