Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FN0072 | FN0226 | FN0072 | FN0226 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | 0.421 |
FN0072 | ribBA | FN0072 | FN1508 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.743 |
FN0225 | FN0226 | FN0225 | FN0226 | Gluconate permease. | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | 0.877 |
FN0225 | FN0227 | FN0225 | FN0227 | Gluconate permease. | Hypothetical protein. | 0.902 |
FN0225 | FN0228 | FN0225 | FN0228 | Gluconate permease. | Transcriptional regulator, DeoR family. | 0.713 |
FN0225 | FN0229 | FN0225 | FN0229 | Gluconate permease. | Hypothetical protein. | 0.410 |
FN0225 | FN0230 | FN0225 | FN0230 | Gluconate permease. | Hypothetical protein. | 0.410 |
FN0226 | FN0072 | FN0226 | FN0072 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.421 |
FN0226 | FN0225 | FN0226 | FN0225 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | Gluconate permease. | 0.877 |
FN0226 | FN0227 | FN0226 | FN0227 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | Hypothetical protein. | 0.936 |
FN0226 | FN0228 | FN0226 | FN0228 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | Transcriptional regulator, DeoR family. | 0.729 |
FN0226 | FN0229 | FN0226 | FN0229 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | Hypothetical protein. | 0.429 |
FN0226 | FN0230 | FN0226 | FN0230 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | Hypothetical protein. | 0.429 |
FN0226 | FN0231 | FN0226 | FN0231 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | Unknown. | 0.403 |
FN0226 | ribBA | FN0226 | FN1508 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.527 |
FN0226 | rsmA | FN0226 | FN0287 | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.542 |
FN0227 | FN0225 | FN0227 | FN0225 | Hypothetical protein. | Gluconate permease. | 0.902 |
FN0227 | FN0226 | FN0227 | FN0226 | Hypothetical protein. | Pyridoxal phosphate biosynthetic protein pdxA; Catalyzes the NAD-dependent oxidation and subsequent decarboxylation of D-threonate 4-phosphate to produce dihydroxyacetone phosphate (DHAP); Belongs to the PdxA family. PdxA2 subfamily. | 0.936 |
FN0227 | FN0228 | FN0227 | FN0228 | Hypothetical protein. | Transcriptional regulator, DeoR family. | 0.821 |
FN0227 | FN0229 | FN0227 | FN0229 | Hypothetical protein. | Hypothetical protein. | 0.466 |
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