Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FN0265 | FN0266 | FN0265 | FN0266 | Cell division protein ftsX. | Membrane protein related to metalloendopeptidase. | 0.945 |
FN0265 | FN0268 | FN0265 | FN0268 | Cell division protein ftsX. | DNA repair protein recN; May be involved in recombinational repair of damaged DNA. | 0.748 |
FN0265 | FN0269 | FN0265 | FN0269 | Cell division protein ftsX. | Transposase. | 0.663 |
FN0265 | era | FN0265 | FN0270 | Cell division protein ftsX. | GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.640 |
FN0265 | nadK | FN0265 | FN0267 | Cell division protein ftsX. | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.744 |
FN0266 | FN0265 | FN0266 | FN0265 | Membrane protein related to metalloendopeptidase. | Cell division protein ftsX. | 0.945 |
FN0266 | FN0268 | FN0266 | FN0268 | Membrane protein related to metalloendopeptidase. | DNA repair protein recN; May be involved in recombinational repair of damaged DNA. | 0.784 |
FN0266 | FN0269 | FN0266 | FN0269 | Membrane protein related to metalloendopeptidase. | Transposase. | 0.697 |
FN0266 | era | FN0266 | FN0270 | Membrane protein related to metalloendopeptidase. | GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.639 |
FN0266 | nadK | FN0266 | FN0267 | Membrane protein related to metalloendopeptidase. | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.753 |
FN0268 | FN0265 | FN0268 | FN0265 | DNA repair protein recN; May be involved in recombinational repair of damaged DNA. | Cell division protein ftsX. | 0.748 |
FN0268 | FN0266 | FN0268 | FN0266 | DNA repair protein recN; May be involved in recombinational repair of damaged DNA. | Membrane protein related to metalloendopeptidase. | 0.784 |
FN0268 | FN0269 | FN0268 | FN0269 | DNA repair protein recN; May be involved in recombinational repair of damaged DNA. | Transposase. | 0.714 |
FN0268 | era | FN0268 | FN0270 | DNA repair protein recN; May be involved in recombinational repair of damaged DNA. | GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.689 |
FN0268 | nadK | FN0268 | FN0267 | DNA repair protein recN; May be involved in recombinational repair of damaged DNA. | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.860 |
FN0269 | FN0265 | FN0269 | FN0265 | Transposase. | Cell division protein ftsX. | 0.663 |
FN0269 | FN0266 | FN0269 | FN0266 | Transposase. | Membrane protein related to metalloendopeptidase. | 0.697 |
FN0269 | FN0268 | FN0269 | FN0268 | Transposase. | DNA repair protein recN; May be involved in recombinational repair of damaged DNA. | 0.714 |
FN0269 | era | FN0269 | FN0270 | Transposase. | GTP-binding protein era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.783 |
FN0269 | nadK | FN0269 | FN0267 | Transposase. | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.689 |
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