Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FN0460 | FN0539 | FN0460 | FN0539 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Precorrin-2 oxidase; Ferrochelatase. | 0.550 |
FN0460 | FN0644 | FN0460 | FN0644 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Uroporphyrin-III C-methyltransferase; uroporphyrinogen-III synthase. | 0.996 |
FN0460 | hemA | FN0460 | FN0646 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.860 |
FN0460 | hemC | FN0460 | FN0645 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.994 |
FN0460 | hemL | FN0460 | FN0540 | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.991 |
FN0539 | FN0460 | FN0539 | FN0460 | Precorrin-2 oxidase; Ferrochelatase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.550 |
FN0539 | FN0644 | FN0539 | FN0644 | Precorrin-2 oxidase; Ferrochelatase. | Uroporphyrin-III C-methyltransferase; uroporphyrinogen-III synthase. | 0.996 |
FN0539 | hemA | FN0539 | FN0646 | Precorrin-2 oxidase; Ferrochelatase. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.532 |
FN0539 | hemC | FN0539 | FN0645 | Precorrin-2 oxidase; Ferrochelatase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.698 |
FN0539 | hemL | FN0539 | FN0540 | Precorrin-2 oxidase; Ferrochelatase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.877 |
FN0641 | FN0642 | FN0641 | FN0642 | Methyltransferase. | Hypothetical protein. | 0.757 |
FN0641 | FN0643 | FN0641 | FN0643 | Methyltransferase. | Hypothetical DNA-binding protein. | 0.757 |
FN0641 | FN0644 | FN0641 | FN0644 | Methyltransferase. | Uroporphyrin-III C-methyltransferase; uroporphyrinogen-III synthase. | 0.749 |
FN0641 | FN0647 | FN0641 | FN0647 | Methyltransferase. | Transcriptional regulator. | 0.623 |
FN0641 | hemA | FN0641 | FN0646 | Methyltransferase. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.570 |
FN0641 | hemC | FN0641 | FN0645 | Methyltransferase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.675 |
FN0642 | FN0641 | FN0642 | FN0641 | Hypothetical protein. | Methyltransferase. | 0.757 |
FN0642 | FN0643 | FN0642 | FN0643 | Hypothetical protein. | Hypothetical DNA-binding protein. | 0.773 |
FN0642 | FN0644 | FN0642 | FN0644 | Hypothetical protein. | Uroporphyrin-III C-methyltransferase; uroporphyrinogen-III synthase. | 0.741 |
FN0642 | FN0647 | FN0642 | FN0647 | Hypothetical protein. | Transcriptional regulator. | 0.409 |
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