STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FN0965D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (321 aa)    
Predicted Functional Partners:
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
 
   
 0.903
FN0730
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.903
cbiD
CbiD protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
    0.778
FN0966
Precorrin-6Y C5,15-methyltransferase (decarboxylating).
  
    0.777
FN0968
Hypothetical protein.
       0.741
FN0969
Hypothetical protein.
       0.741
FN0964
Precorrin-8W decarboxylase.
       0.714
FN0970
Precorrin-8X methylmutase.
       0.673
FN0973
Histidinol-phosphate aminotransferase.
 
     0.670
FN0971
Hypothetical cytosolic protein.
       0.650
Your Current Organism:
Fusobacterium nucleatum ATCC 25586
NCBI taxonomy Id: 190304
Other names: F. nucleatum subsp. nucleatum ATCC 25586, Fusobacterium nucleatum subsp. nucleatum ATCC 25586, Fusobacterium nucleatum subsp. nucleatum JCM 8532, Fusobacterium nucleatum subsp. nucleatum str. ATCC 25586, Fusobacterium nucleatum subsp. nucleatum strain ATCC 25586
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