Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
FN0244 | FN1189 | COP associated protein. | Hypothetical protein. | 0.705 |
FN0244 | FN1190 | COP associated protein. | Probable cadmium-transporting ATPase. | 0.705 |
FN0259 | FN1189 | Zinc-transporting ATPase. | Hypothetical protein. | 0.705 |
FN0259 | FN1190 | Zinc-transporting ATPase. | Probable cadmium-transporting ATPase. | 0.705 |
FN0297 | FN1190 | ATPase associated with chromosome architecture/replication. | Probable cadmium-transporting ATPase. | 0.468 |
FN1188 | FN1189 | Hypothetical protein. | Hypothetical protein. | 0.649 |
FN1188 | FN1190 | Hypothetical protein. | Probable cadmium-transporting ATPase. | 0.642 |
FN1188 | FN1191 | Hypothetical protein. | Unknown. | 0.593 |
FN1188 | FN1192 | Hypothetical protein. | Unknown. | 0.536 |
FN1189 | FN0244 | Hypothetical protein. | COP associated protein. | 0.705 |
FN1189 | FN0259 | Hypothetical protein. | Zinc-transporting ATPase. | 0.705 |
FN1189 | FN1188 | Hypothetical protein. | Hypothetical protein. | 0.649 |
FN1189 | FN1190 | Hypothetical protein. | Probable cadmium-transporting ATPase. | 0.773 |
FN1189 | FN1191 | Hypothetical protein. | Unknown. | 0.672 |
FN1189 | FN1192 | Hypothetical protein. | Unknown. | 0.581 |
FN1189 | FN1749 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.460 |
FN1189 | FN1750 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.460 |
FN1189 | FN1751 | Hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.460 |
FN1190 | FN0244 | Probable cadmium-transporting ATPase. | COP associated protein. | 0.705 |
FN1190 | FN0259 | Probable cadmium-transporting ATPase. | Zinc-transporting ATPase. | 0.705 |
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