STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FN1424ACYL-COA dehydrogenase, short-chain specific; Electron transfer flavoprotein alpha-subunit; RUBREDOXIN. (636 aa)    
Predicted Functional Partners:
FN1020
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.984
FN0183
Glycerol-3-phosphate dehydrogenase.
  
 
 0.979
FN0495
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.977
FN1172
Phosphate acetyltransferase.
     
 0.961
FN0204
Glutaconyl-CoA decarboxylase A subunit.
 
 
 0.958
FN0816
Dehydrogenase with MaoC-like domain.
  
 0.950
FN1019
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.933
FN0262
Formate acetyltransferase.
     
 0.932
FN0814
Propionate CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
  
 
 0.932
FN0271
Enoyl-CoA hydratase.
 
 0.912
Your Current Organism:
Fusobacterium nucleatum ATCC 25586
NCBI taxonomy Id: 190304
Other names: F. nucleatum subsp. nucleatum ATCC 25586, Fusobacterium nucleatum subsp. nucleatum ATCC 25586, Fusobacterium nucleatum subsp. nucleatum JCM 8532, Fusobacterium nucleatum subsp. nucleatum str. ATCC 25586, Fusobacterium nucleatum subsp. nucleatum strain ATCC 25586
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