Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FN0217 | FN1550 | FN0217 | FN1550 | Catabolite gene activator. | Hypothetical protein. | 0.728 |
FN0545 | FN1550 | FN0545 | FN1550 | Lipopolysaccharide core biosynthesis protein rfaY. | Hypothetical protein. | 0.508 |
FN0545 | FN1975 | FN0545 | FN1975 | Lipopolysaccharide core biosynthesis protein rfaY. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.573 |
FN0545 | htpG | FN0545 | FN0321 | Lipopolysaccharide core biosynthesis protein rfaY. | Heat shock protein htpG; Molecular chaperone. Has ATPase activity. | 0.984 |
FN1550 | FN0217 | FN1550 | FN0217 | Hypothetical protein. | Catabolite gene activator. | 0.728 |
FN1550 | FN0545 | FN1550 | FN0545 | Hypothetical protein. | Lipopolysaccharide core biosynthesis protein rfaY. | 0.508 |
FN1550 | FN1551 | FN1550 | FN1551 | Hypothetical protein. | Hypothetical protein. | 0.736 |
FN1550 | FN1552 | FN1550 | FN1552 | Hypothetical protein. | Abortive phage resistance protein. | 0.686 |
FN1550 | FN1553 | FN1550 | FN1553 | Hypothetical protein. | Abortive phage resistance protein. | 0.686 |
FN1550 | FN1554 | FN1550 | FN1554 | Hypothetical protein. | Fusobacterium outer membrane protein family. | 0.432 |
FN1550 | FN1901 | FN1550 | FN1901 | Hypothetical protein. | Transcription regulator, CRP family. | 0.728 |
FN1550 | FN1975 | FN1550 | FN1975 | Hypothetical protein. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.416 |
FN1550 | htpG | FN1550 | FN0321 | Hypothetical protein. | Heat shock protein htpG; Molecular chaperone. Has ATPase activity. | 0.429 |
FN1551 | FN1550 | FN1551 | FN1550 | Hypothetical protein. | Hypothetical protein. | 0.736 |
FN1551 | FN1552 | FN1551 | FN1552 | Hypothetical protein. | Abortive phage resistance protein. | 0.752 |
FN1551 | FN1553 | FN1551 | FN1553 | Hypothetical protein. | Abortive phage resistance protein. | 0.752 |
FN1551 | FN1554 | FN1551 | FN1554 | Hypothetical protein. | Fusobacterium outer membrane protein family. | 0.445 |
FN1552 | FN1550 | FN1552 | FN1550 | Abortive phage resistance protein. | Hypothetical protein. | 0.686 |
FN1552 | FN1551 | FN1552 | FN1551 | Abortive phage resistance protein. | Hypothetical protein. | 0.752 |
FN1552 | FN1553 | FN1552 | FN1553 | Abortive phage resistance protein. | Abortive phage resistance protein. | 0.944 |
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