STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FN1550Hypothetical protein. (247 aa)    
Predicted Functional Partners:
FN1551
Hypothetical protein.
       0.736
FN0217
Catabolite gene activator.
  
 0.728
FN1901
Transcription regulator, CRP family.
  
 0.728
FN1552
Abortive phage resistance protein.
       0.686
FN1553
Abortive phage resistance protein.
       0.686
FN0545
Lipopolysaccharide core biosynthesis protein rfaY.
   
 0.508
FN1554
Fusobacterium outer membrane protein family.
  
    0.432
htpG
Heat shock protein htpG; Molecular chaperone. Has ATPase activity.
    
 
 0.429
FN1975
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
    
   0.416
Your Current Organism:
Fusobacterium nucleatum ATCC 25586
NCBI taxonomy Id: 190304
Other names: F. nucleatum subsp. nucleatum ATCC 25586, Fusobacterium nucleatum subsp. nucleatum ATCC 25586, Fusobacterium nucleatum subsp. nucleatum JCM 8532, Fusobacterium nucleatum subsp. nucleatum str. ATCC 25586, Fusobacterium nucleatum subsp. nucleatum strain ATCC 25586
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