Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FN1927 | FN1928 | FN1927 | FN1928 | DEGV protein. | Transcriptional regulator, MerR family. | 0.855 |
FN1927 | FN1929 | FN1927 | FN1929 | DEGV protein. | Competence-damage protein cinA; Belongs to the CinA family. | 0.855 |
FN1927 | FN1930 | FN1927 | FN1930 | DEGV protein. | Phosphatidylglycerophosphatase A. | 0.828 |
FN1927 | FN1931 | FN1927 | FN1931 | DEGV protein. | Protease. | 0.795 |
FN1927 | FN1933 | FN1927 | FN1933 | DEGV protein. | Hypothetical protein. | 0.756 |
FN1927 | coaE | FN1927 | FN1932 | DEGV protein. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.810 |
FN1928 | FN1927 | FN1928 | FN1927 | Transcriptional regulator, MerR family. | DEGV protein. | 0.855 |
FN1928 | FN1929 | FN1928 | FN1929 | Transcriptional regulator, MerR family. | Competence-damage protein cinA; Belongs to the CinA family. | 0.876 |
FN1928 | FN1930 | FN1928 | FN1930 | Transcriptional regulator, MerR family. | Phosphatidylglycerophosphatase A. | 0.843 |
FN1928 | FN1931 | FN1928 | FN1931 | Transcriptional regulator, MerR family. | Protease. | 0.780 |
FN1928 | FN1933 | FN1928 | FN1933 | Transcriptional regulator, MerR family. | Hypothetical protein. | 0.768 |
FN1928 | coaE | FN1928 | FN1932 | Transcriptional regulator, MerR family. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.817 |
FN1929 | FN1927 | FN1929 | FN1927 | Competence-damage protein cinA; Belongs to the CinA family. | DEGV protein. | 0.855 |
FN1929 | FN1928 | FN1929 | FN1928 | Competence-damage protein cinA; Belongs to the CinA family. | Transcriptional regulator, MerR family. | 0.876 |
FN1929 | FN1930 | FN1929 | FN1930 | Competence-damage protein cinA; Belongs to the CinA family. | Phosphatidylglycerophosphatase A. | 0.819 |
FN1929 | FN1931 | FN1929 | FN1931 | Competence-damage protein cinA; Belongs to the CinA family. | Protease. | 0.807 |
FN1929 | FN1933 | FN1929 | FN1933 | Competence-damage protein cinA; Belongs to the CinA family. | Hypothetical protein. | 0.768 |
FN1929 | coaD | FN1929 | FN0156 | Competence-damage protein cinA; Belongs to the CinA family. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.444 |
FN1929 | coaE | FN1929 | FN1932 | Competence-damage protein cinA; Belongs to the CinA family. | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.816 |
FN1929 | polA | FN1929 | FN0705 | Competence-damage protein cinA; Belongs to the CinA family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.636 |
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