STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899385_00554Unannotated protein. (208 aa)    
Predicted Functional Partners:
GCA_001899385_00555
Unannotated protein.
     
 0.772
GCA_001899385_01390
Unannotated protein.
      0.751
GCA_001899385_01851
Unannotated protein.
   
 
  0.725
GCA_001899385_00284
Unannotated protein.
   
 
  0.722
GCA_001899385_01207
Unannotated protein.
    
 0.716
GCA_001899385_00700
Unannotated protein.
    
 0.694
GCA_001899385_01446
Unannotated protein.
    
 0.677
GCA_001899385_01698
Unannotated protein.
    
 0.674
GCA_001899385_00722
Unannotated protein.
    
   0.669
GCA_001899385_00911
Unannotated protein.
    
  0.639
Your Current Organism:
Caenarcanum bioreactoricola
NCBI taxonomy Id: 1906166
Other names: C. Caenarcanum bioreactoricola, Candidatus Caenarcanum bioreactoricola
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.