STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC_1225Glucose-fructose oxidoreductase; Identified by match to protein family HMM. (366 aa)    
Predicted Functional Partners:
CC_1224
Gluconolactonase; Similar to SP:Q01578 GB:X67189 PID:48655; identified by sequence similarity; putative.
 
 
 0.986
CC_1226
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.962
CC_0821
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM.
  
  
 0.771
CC_1301
iolB protein; Similar to SP:P42413 PID:709982 PID:904208 PID:2280501 GB:AL009126; identified by sequence similarity; putative.
  
  
 0.667
CC_1299
iolD protein; Identified by match to protein family HMM; Belongs to the TPP enzyme family.
  
  
 0.664
CC_1629
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.620
CC_1223
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.606
CC_2128
Gluconolactonase, putative; Similar to SP:Q01578 GB:X67189 PID:48655; identified by sequence similarity; putative.
 
 
 0.605
CC_3611
Identified by match to PFAM protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.547
CC_1222
Hypothetical protein; Identified by Glimmer2; putative.
       0.542
Your Current Organism:
Caulobacter vibrioides CB15
NCBI taxonomy Id: 190650
Other names: C. vibrioides CB15, Caulobacter crescentus CB15, Caulobacter vibrioides ATCC 19089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.