STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS65467.1NAD-binding protein. (313 aa)    
Predicted Functional Partners:
ANS65465.1
Decarboxylase.
 
     0.918
ANS65466.1
Decarboxylase.
 
     0.905
ANS65468.1
Putative amidase; Belongs to the amidase family.
 
    0.834
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 
 0.709
ANS69356.1
3-carboxymuconate cycloisomerase.
  
 
 0.675
ANS65469.1
Hypothetical protein.
 
     0.652
ANS65464.1
LuxAB-like protein (oxygenase).
       0.640
ANS63116.1
Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   0.634
ANS65473.1
Amino acid ABC transporter ATP-binding protein.
 
     0.537
ANS64359.1
Ectoine hydroxylase.
 
   
 0.481
Your Current Organism:
Streptomyces lincolnensis
NCBI taxonomy Id: 1915
Other names: ATCC 25466, BCRC 11173, CBS 630.70, CBS 699.69, CCRC 11173, CCRC:11173, DSM 2013, DSM 40355, IFO 13054, ISP 5355, JCM 4287, JCM 4488, KCTC 9088, KCTC 9089, NBRC 13054, NCIMB 9413, NRRL 2936, NRRL-ISP 5355, S. lincolnensis, VKM Ac-727
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