STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899445_00250Unannotated protein. (723 aa)    
Predicted Functional Partners:
GCA_001899445_00064
Unannotated protein.
   
 0.910
GCA_001899445_00060
Unannotated protein.
   
 0.835
GCA_001899445_00905
Unannotated protein.
    
 
 0.830
GCA_001899445_01101
Unannotated protein.
    
 
 0.830
GCA_001899445_00074
Unannotated protein.
 
 0.777
GCA_001899445_01030
Unannotated protein.
 
  
 0.769
GCA_001899445_01674
Unannotated protein.
  
  
 0.756
GCA_001899445_00036
Unannotated protein.
 
   
 0.739
GCA_001899445_00124
Unannotated protein.
    
 0.713
GCA_001899445_00539
Unannotated protein.
 
   
 0.710
Your Current Organism:
Desulfopertinax cowenii
NCBI taxonomy Id: 1919273
Other names: C. Desulfopertinax cowenii, Candidatus Desulfopertinax cowenii, Candidatus Desulfopertinax inferamarinus
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