node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIB10903.1 | AIB11135.1 | ABAZ39_02490 | ABAZ39_03700 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
AIB10903.1 | AIB11138.1 | ABAZ39_02490 | ABAZ39_03715 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
AIB10903.1 | rplD | ABAZ39_02490 | ABAZ39_03635 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.823 |
AIB10903.1 | rpsA | ABAZ39_02490 | ABAZ39_01200 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.999 |
AIB10903.1 | rpsD | ABAZ39_02490 | ABAZ39_11225 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
AIB10903.1 | rpsG | ABAZ39_02490 | ABAZ39_03610 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.838 |
AIB10903.1 | rpsK | ABAZ39_02490 | ABAZ39_08705 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
AIB10903.1 | rpsL | ABAZ39_02490 | ABAZ39_03605 | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.833 |
AIB11135.1 | AIB10903.1 | ABAZ39_03700 | ABAZ39_02490 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
AIB11135.1 | AIB11138.1 | ABAZ39_03700 | ABAZ39_03715 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
AIB11135.1 | rplC | ABAZ39_03700 | ABAZ39_03630 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.999 |
AIB11135.1 | rplD | ABAZ39_03700 | ABAZ39_03635 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
AIB11135.1 | rplJ | ABAZ39_03700 | ABAZ39_03580 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.998 |
AIB11135.1 | rpsA | ABAZ39_03700 | ABAZ39_01200 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.999 |
AIB11135.1 | rpsD | ABAZ39_03700 | ABAZ39_11225 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
AIB11135.1 | rpsG | ABAZ39_03700 | ABAZ39_03610 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
AIB11135.1 | rpsK | ABAZ39_03700 | ABAZ39_08705 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
AIB11135.1 | rpsL | ABAZ39_03700 | ABAZ39_03605 | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
AIB11138.1 | AIB10903.1 | ABAZ39_03715 | ABAZ39_02490 | 30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
AIB11138.1 | AIB11135.1 | ABAZ39_03715 | ABAZ39_03700 | 30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |