STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIB11238.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (883 aa)    
Predicted Functional Partners:
AIB10761.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.836
AIB12536.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.836
AIB11461.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.810
AIB12705.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.729
AIB12935.1
Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.729
treS
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.727
AIB11011.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.716
glgE
Alpha-amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
     
 0.709
AIB12514.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.709
AIB11178.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.683
Your Current Organism:
Azospirillum brasilense
NCBI taxonomy Id: 192
Other names: A. brasilense, ATCC 29145, Azospirillum brasiliense, LMG 13127, LMG:13127, NBRC 102289, NRRL B-14647, Roseomonas fauriae, Spirillum lipoferum, bacterium ASAZOES-148, strain sp. 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.