STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIB11762.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. (510 aa)    
Predicted Functional Partners:
AIB11747.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.864
AIB11685.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.792
AIB11247.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.737
degP2
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.
  
  
 
0.555
AIB11761.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
AIB12565.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.489
AIB10568.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.473
rsfS
Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
 
   0.468
AIB11759.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
AIB11760.1
Lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
Your Current Organism:
Azospirillum brasilense
NCBI taxonomy Id: 192
Other names: A. brasilense, ATCC 29145, Azospirillum brasiliense, LMG 13127, LMG:13127, NBRC 102289, NRRL B-14647, Roseomonas fauriae, Spirillum lipoferum, bacterium ASAZOES-148, strain sp. 7
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