STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIB12510.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (629 aa)    
Predicted Functional Partners:
AIB12509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.923
dctQ
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.890
AIB10596.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.850
AIB10595.1
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.816
dctP
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.783
pta2
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.707
AIB11068.1
acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.702
AIB13178.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.604
AIB12511.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.530
AIB12508.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.527
Your Current Organism:
Azospirillum brasilense
NCBI taxonomy Id: 192
Other names: A. brasilense, ATCC 29145, Azospirillum brasiliense, LMG 13127, LMG:13127, NBRC 102289, NRRL B-14647, Roseomonas fauriae, Spirillum lipoferum, bacterium ASAZOES-148, strain sp. 7
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.