node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cj0313 | Cj0315 | Cj0313 | Cj0315 | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | Putative HAD-superfamily hydrolase, subfamily IIA; Original (2000) note: Cj0315, unknown, len: 255 aa; similar to the hypothetical proteins TR:O59622 (EMBL:AB009530) Pyrococcus horikoshii PHBR011 (263 aa),fasta scores; opt: 185 z-score: 375.5 E(): 1.2e-13, 28.1% identity in 267 aa overlapNAGD_ECOLI nagD protein (250 aa), fasta scores; opt: 259 z-score: 266.1 E(): 1.4e-07,26.0% identity in 250 aa overlap. No Hp match; Updated (2006) note: Pfam domains PF00702 haloacid dehalogenase-like hydrolase, PF02142 MGS-like domain and PF03558 TBSV core protein P21/P22 were identified with separate [...] | 0.734 |
Cj0313 | hisC | Cj0313 | Cj0317 | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | Original (2000) note: Cj0317, hisC, probable histidinol-phosphate aminotransferase, len: 364 aa; similar to many e.g. HIS8_BACSU histidinol-phosphate aminotransferase (EC 2.6.1.9) (360 aa), fasta scores; opt: 762 z-score: 1062.4 E(): 0, 36.2% identity in 367 aa overlap. No Hp match. Also similar to Cj1437c (hisC2) (30.0% identity in 347 aa overlap). Contains Pfam match to entry PF00222 aminotran_2, Aminotransferases class-II,score 60.80, E-value 2.9e-14; Updated (2006) note: Pfam domains PF00155 Aminotransferase class I and II were identified. Further support given to product function. [...] | 0.674 |
Cj0313 | lysA | Cj0313 | Cj0314 | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.673 |
Cj0313 | pheA | Cj0313 | Cj0316 | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | Original (2000) note: Cj0316, pheA, probable chorismate mutase/prephenate dehydratase, len: 357 aa; similar to many e.g. PHEA_ECOLI chorismate mutase (EC 5.4.99.5)/prephenate dehydratase (EC 4.2.1.51) (386 aa),fasta scores; opt: 482 z-score: 733.8 E(): 0, 33.1% identity in 366 aa overlap. Similar in N-term to possible truncated pheA in Hp; HP0291 hypothetical protein (96 aa) 35.8% identity in 81 aa overlap. Contains PS00857 and PS00858 Prephenate dehydratase signatures 1 and 2, and Pfam match to entry PF00800 PDT, Prephenate dehydratase,score 268.20, E-value 1.1e-76; Updated (2006) not [...] | 0.698 |
Cj0313 | pth | Cj0313 | Cj0312 | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.826 |
Cj0313 | rplY | Cj0313 | Cj0311 | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | Putative 50S ribosomal protein L25 (general stress protein Ctc); This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.838 |
Cj0315 | Cj0313 | Cj0315 | Cj0313 | Putative HAD-superfamily hydrolase, subfamily IIA; Original (2000) note: Cj0315, unknown, len: 255 aa; similar to the hypothetical proteins TR:O59622 (EMBL:AB009530) Pyrococcus horikoshii PHBR011 (263 aa),fasta scores; opt: 185 z-score: 375.5 E(): 1.2e-13, 28.1% identity in 267 aa overlapNAGD_ECOLI nagD protein (250 aa), fasta scores; opt: 259 z-score: 266.1 E(): 1.4e-07,26.0% identity in 250 aa overlap. No Hp match; Updated (2006) note: Pfam domains PF00702 haloacid dehalogenase-like hydrolase, PF02142 MGS-like domain and PF03558 TBSV core protein P21/P22 were identified with separate [...] | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | 0.734 |
Cj0315 | hisC | Cj0315 | Cj0317 | Putative HAD-superfamily hydrolase, subfamily IIA; Original (2000) note: Cj0315, unknown, len: 255 aa; similar to the hypothetical proteins TR:O59622 (EMBL:AB009530) Pyrococcus horikoshii PHBR011 (263 aa),fasta scores; opt: 185 z-score: 375.5 E(): 1.2e-13, 28.1% identity in 267 aa overlapNAGD_ECOLI nagD protein (250 aa), fasta scores; opt: 259 z-score: 266.1 E(): 1.4e-07,26.0% identity in 250 aa overlap. No Hp match; Updated (2006) note: Pfam domains PF00702 haloacid dehalogenase-like hydrolase, PF02142 MGS-like domain and PF03558 TBSV core protein P21/P22 were identified with separate [...] | Original (2000) note: Cj0317, hisC, probable histidinol-phosphate aminotransferase, len: 364 aa; similar to many e.g. HIS8_BACSU histidinol-phosphate aminotransferase (EC 2.6.1.9) (360 aa), fasta scores; opt: 762 z-score: 1062.4 E(): 0, 36.2% identity in 367 aa overlap. No Hp match. Also similar to Cj1437c (hisC2) (30.0% identity in 347 aa overlap). Contains Pfam match to entry PF00222 aminotran_2, Aminotransferases class-II,score 60.80, E-value 2.9e-14; Updated (2006) note: Pfam domains PF00155 Aminotransferase class I and II were identified. Further support given to product function. [...] | 0.800 |
Cj0315 | lysA | Cj0315 | Cj0314 | Putative HAD-superfamily hydrolase, subfamily IIA; Original (2000) note: Cj0315, unknown, len: 255 aa; similar to the hypothetical proteins TR:O59622 (EMBL:AB009530) Pyrococcus horikoshii PHBR011 (263 aa),fasta scores; opt: 185 z-score: 375.5 E(): 1.2e-13, 28.1% identity in 267 aa overlapNAGD_ECOLI nagD protein (250 aa), fasta scores; opt: 259 z-score: 266.1 E(): 1.4e-07,26.0% identity in 250 aa overlap. No Hp match; Updated (2006) note: Pfam domains PF00702 haloacid dehalogenase-like hydrolase, PF02142 MGS-like domain and PF03558 TBSV core protein P21/P22 were identified with separate [...] | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.804 |
Cj0315 | pheA | Cj0315 | Cj0316 | Putative HAD-superfamily hydrolase, subfamily IIA; Original (2000) note: Cj0315, unknown, len: 255 aa; similar to the hypothetical proteins TR:O59622 (EMBL:AB009530) Pyrococcus horikoshii PHBR011 (263 aa),fasta scores; opt: 185 z-score: 375.5 E(): 1.2e-13, 28.1% identity in 267 aa overlapNAGD_ECOLI nagD protein (250 aa), fasta scores; opt: 259 z-score: 266.1 E(): 1.4e-07,26.0% identity in 250 aa overlap. No Hp match; Updated (2006) note: Pfam domains PF00702 haloacid dehalogenase-like hydrolase, PF02142 MGS-like domain and PF03558 TBSV core protein P21/P22 were identified with separate [...] | Original (2000) note: Cj0316, pheA, probable chorismate mutase/prephenate dehydratase, len: 357 aa; similar to many e.g. PHEA_ECOLI chorismate mutase (EC 5.4.99.5)/prephenate dehydratase (EC 4.2.1.51) (386 aa),fasta scores; opt: 482 z-score: 733.8 E(): 0, 33.1% identity in 366 aa overlap. Similar in N-term to possible truncated pheA in Hp; HP0291 hypothetical protein (96 aa) 35.8% identity in 81 aa overlap. Contains PS00857 and PS00858 Prephenate dehydratase signatures 1 and 2, and Pfam match to entry PF00800 PDT, Prephenate dehydratase,score 268.20, E-value 1.1e-76; Updated (2006) not [...] | 0.818 |
Cj0315 | pth | Cj0315 | Cj0312 | Putative HAD-superfamily hydrolase, subfamily IIA; Original (2000) note: Cj0315, unknown, len: 255 aa; similar to the hypothetical proteins TR:O59622 (EMBL:AB009530) Pyrococcus horikoshii PHBR011 (263 aa),fasta scores; opt: 185 z-score: 375.5 E(): 1.2e-13, 28.1% identity in 267 aa overlapNAGD_ECOLI nagD protein (250 aa), fasta scores; opt: 259 z-score: 266.1 E(): 1.4e-07,26.0% identity in 250 aa overlap. No Hp match; Updated (2006) note: Pfam domains PF00702 haloacid dehalogenase-like hydrolase, PF02142 MGS-like domain and PF03558 TBSV core protein P21/P22 were identified with separate [...] | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.727 |
Cj0315 | rplY | Cj0315 | Cj0311 | Putative HAD-superfamily hydrolase, subfamily IIA; Original (2000) note: Cj0315, unknown, len: 255 aa; similar to the hypothetical proteins TR:O59622 (EMBL:AB009530) Pyrococcus horikoshii PHBR011 (263 aa),fasta scores; opt: 185 z-score: 375.5 E(): 1.2e-13, 28.1% identity in 267 aa overlapNAGD_ECOLI nagD protein (250 aa), fasta scores; opt: 259 z-score: 266.1 E(): 1.4e-07,26.0% identity in 250 aa overlap. No Hp match; Updated (2006) note: Pfam domains PF00702 haloacid dehalogenase-like hydrolase, PF02142 MGS-like domain and PF03558 TBSV core protein P21/P22 were identified with separate [...] | Putative 50S ribosomal protein L25 (general stress protein Ctc); This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.673 |
hisC | Cj0313 | Cj0317 | Cj0313 | Original (2000) note: Cj0317, hisC, probable histidinol-phosphate aminotransferase, len: 364 aa; similar to many e.g. HIS8_BACSU histidinol-phosphate aminotransferase (EC 2.6.1.9) (360 aa), fasta scores; opt: 762 z-score: 1062.4 E(): 0, 36.2% identity in 367 aa overlap. No Hp match. Also similar to Cj1437c (hisC2) (30.0% identity in 347 aa overlap). Contains Pfam match to entry PF00222 aminotran_2, Aminotransferases class-II,score 60.80, E-value 2.9e-14; Updated (2006) note: Pfam domains PF00155 Aminotransferase class I and II were identified. Further support given to product function. [...] | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | 0.674 |
hisC | Cj0315 | Cj0317 | Cj0315 | Original (2000) note: Cj0317, hisC, probable histidinol-phosphate aminotransferase, len: 364 aa; similar to many e.g. HIS8_BACSU histidinol-phosphate aminotransferase (EC 2.6.1.9) (360 aa), fasta scores; opt: 762 z-score: 1062.4 E(): 0, 36.2% identity in 367 aa overlap. No Hp match. Also similar to Cj1437c (hisC2) (30.0% identity in 347 aa overlap). Contains Pfam match to entry PF00222 aminotran_2, Aminotransferases class-II,score 60.80, E-value 2.9e-14; Updated (2006) note: Pfam domains PF00155 Aminotransferase class I and II were identified. Further support given to product function. [...] | Putative HAD-superfamily hydrolase, subfamily IIA; Original (2000) note: Cj0315, unknown, len: 255 aa; similar to the hypothetical proteins TR:O59622 (EMBL:AB009530) Pyrococcus horikoshii PHBR011 (263 aa),fasta scores; opt: 185 z-score: 375.5 E(): 1.2e-13, 28.1% identity in 267 aa overlapNAGD_ECOLI nagD protein (250 aa), fasta scores; opt: 259 z-score: 266.1 E(): 1.4e-07,26.0% identity in 250 aa overlap. No Hp match; Updated (2006) note: Pfam domains PF00702 haloacid dehalogenase-like hydrolase, PF02142 MGS-like domain and PF03558 TBSV core protein P21/P22 were identified with separate [...] | 0.800 |
hisC | lysA | Cj0317 | Cj0314 | Original (2000) note: Cj0317, hisC, probable histidinol-phosphate aminotransferase, len: 364 aa; similar to many e.g. HIS8_BACSU histidinol-phosphate aminotransferase (EC 2.6.1.9) (360 aa), fasta scores; opt: 762 z-score: 1062.4 E(): 0, 36.2% identity in 367 aa overlap. No Hp match. Also similar to Cj1437c (hisC2) (30.0% identity in 347 aa overlap). Contains Pfam match to entry PF00222 aminotran_2, Aminotransferases class-II,score 60.80, E-value 2.9e-14; Updated (2006) note: Pfam domains PF00155 Aminotransferase class I and II were identified. Further support given to product function. [...] | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.838 |
hisC | pheA | Cj0317 | Cj0316 | Original (2000) note: Cj0317, hisC, probable histidinol-phosphate aminotransferase, len: 364 aa; similar to many e.g. HIS8_BACSU histidinol-phosphate aminotransferase (EC 2.6.1.9) (360 aa), fasta scores; opt: 762 z-score: 1062.4 E(): 0, 36.2% identity in 367 aa overlap. No Hp match. Also similar to Cj1437c (hisC2) (30.0% identity in 347 aa overlap). Contains Pfam match to entry PF00222 aminotran_2, Aminotransferases class-II,score 60.80, E-value 2.9e-14; Updated (2006) note: Pfam domains PF00155 Aminotransferase class I and II were identified. Further support given to product function. [...] | Original (2000) note: Cj0316, pheA, probable chorismate mutase/prephenate dehydratase, len: 357 aa; similar to many e.g. PHEA_ECOLI chorismate mutase (EC 5.4.99.5)/prephenate dehydratase (EC 4.2.1.51) (386 aa),fasta scores; opt: 482 z-score: 733.8 E(): 0, 33.1% identity in 366 aa overlap. Similar in N-term to possible truncated pheA in Hp; HP0291 hypothetical protein (96 aa) 35.8% identity in 81 aa overlap. Contains PS00857 and PS00858 Prephenate dehydratase signatures 1 and 2, and Pfam match to entry PF00800 PDT, Prephenate dehydratase,score 268.20, E-value 1.1e-76; Updated (2006) not [...] | 0.968 |
hisC | pth | Cj0317 | Cj0312 | Original (2000) note: Cj0317, hisC, probable histidinol-phosphate aminotransferase, len: 364 aa; similar to many e.g. HIS8_BACSU histidinol-phosphate aminotransferase (EC 2.6.1.9) (360 aa), fasta scores; opt: 762 z-score: 1062.4 E(): 0, 36.2% identity in 367 aa overlap. No Hp match. Also similar to Cj1437c (hisC2) (30.0% identity in 347 aa overlap). Contains Pfam match to entry PF00222 aminotran_2, Aminotransferases class-II,score 60.80, E-value 2.9e-14; Updated (2006) note: Pfam domains PF00155 Aminotransferase class I and II were identified. Further support given to product function. [...] | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.673 |
hisC | rplY | Cj0317 | Cj0311 | Original (2000) note: Cj0317, hisC, probable histidinol-phosphate aminotransferase, len: 364 aa; similar to many e.g. HIS8_BACSU histidinol-phosphate aminotransferase (EC 2.6.1.9) (360 aa), fasta scores; opt: 762 z-score: 1062.4 E(): 0, 36.2% identity in 367 aa overlap. No Hp match. Also similar to Cj1437c (hisC2) (30.0% identity in 347 aa overlap). Contains Pfam match to entry PF00222 aminotran_2, Aminotransferases class-II,score 60.80, E-value 2.9e-14; Updated (2006) note: Pfam domains PF00155 Aminotransferase class I and II were identified. Further support given to product function. [...] | Putative 50S ribosomal protein L25 (general stress protein Ctc); This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.676 |
ispH | pth | Cj0894c | Cj0312 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.839 |
lysA | Cj0313 | Cj0314 | Cj0313 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Original (2000) note: Cj0313, probable integral membrane protein, len: 352 aa; 35.9% identity to HP1498; Updated (2006) note: Pfam domains PF03739 Predicted permease YjgP/YjgQ family were identified. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this. Six probable transmembrane helices predicted by TMHMM2.0. Further support given to product function. Functional classification - Membranes, lipoprotei [...] | 0.673 |