STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
coaXPutative transcriptional activator; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. (209 aa)    
Predicted Functional Partners:
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.922
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
    
   0.812
Cj0395c
Hypothetical protein Cj0395c; Original (2000) note: Cj0395c, unknown, len: 96 aa; no Hp match. Functional classification - Unknown.
  
    0.801
Cj0396c
Putative lipoprotein; Original (2000) note: Cj0396c, probable lipoprotein, len: 332 aa; 28.9% identity to HP0863. Conatins N-terminal signal sequence and PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Functional classification - Membranes, lipoproteins and porins.
  
    0.801
Cj0397c
Hypothetical protein Cj0397c; Original (2000) note: Cj0397c, unknown, len: 192 aa; almost identical to C. jejuni hypothetical protein fragment TR:Q46096 (EMBL:U27272), 28.5% identity to HP0864; Updated (2006) note: One probable transmembrace helices identified by TMHMM2.0 within CDS. Literature serach identified paper giving further clues about product function. Functional classification - Conserved hypothetical proteins; PMID:10913692.
  
    0.800
Cj0584
Hypothetical protein Cj0584; Original (2000) note: Cj0584, unknown, len: 199 aa; 36.3% identity to HP1231 (annotated as DNA polymerase III delta prime subunit (holB)). No significant similarity to other holB proteins. Functional classification - Conserved hypothetical proteins.
  
 
   0.770
atpF-2
ATP synthase F0 sector B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.745
Cj1009c
Conserved hypothetical proetin Cj1009c; Original (2000) note: Cj1009c, unknown, len: 466 aa; 29.1% identity to HP0282; Updated (2006) note: Pfam domain PF02080 TrkA-C domain identified within CDS. The TrkA-C domain is typically found next to the -N domain. Currently unknown function. Functional classification - Conserved hypothetical proteins.
  
     0.745
Cj1712
Hypothetical protein Cj1712; Original (2000) note: Cj1712, unknown, len: 178 aa; 40.9% identity to HP1530 (called purine nucleoside phosphorylase (punB). Functional classification -Conserved hypothetical proteins.
  
    0.742
Cj0957c
Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins.
  
    0.740
Your Current Organism:
Campylobacter jejuni NCTC 11168
NCBI taxonomy Id: 192222
Other names: C. jejuni subsp. jejuni NCTC 11168 = ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819 = NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
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