node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cj0247c | Cj0889c | Cj0247c | Cj0889c | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | 0.938 |
Cj0247c | Cj1110c | Cj0247c | Cj1110c | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Original (2000) note: Cj1110c, probable MCP-type signal transduction protein, len: 429 aa; similar to TR:O68016 (EMBL:AF010180) Agrobacterium tumefaciens plasmid pTiC58 MCPA (579 aa), fasta scores; opt: 749 z-score: 785.2 E(): 0, 34.5% identity in 496 aa overlap,and to many other proteins with MCP domains e.g. PILJ_PSEAE PILJ protein (682 aa), fasta scores; opt: 379 z-score: 399.1 E(): 6.3e-15, 26.9% identity in 443 aa overlap, and HLYB_VIBCH hemolysin secretion protein precursor (548 aa), fasta scores; opt: 357 z-score: 377.6 E(): 9.8e-14, 37.0% identity in 173 aa overlap. No Hp ortho [...] | 0.932 |
Cj0247c | Cj1226c | Cj0247c | Cj1226c | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Original (2000) note: Cj1226c, probable two-component sensor (histidine kinase), len: 415 aa; similar to many sensor proteins e.g. CPXA_ECOLI sensor protein CPXA (457 aa), fasta scores; opt: 205 z-score: 241.7 E(): 3.7e-06, 25.2% identity in 270 aa overlap. No Hp ortholog. Contains Pfam match to entry PF00512 signal,Signal carboxyl-terminal domain, and two possible membrane spanning domains. Also similar to Cj1262 (31.0% identity in 410 aa overlap); Updated (2006) note: Pfam domains PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase motifs,PF00512 His Kinase A (phosphoacce [...] | 0.938 |
Cj0247c | Cj1227c | Cj0247c | Cj1227c | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Original (2000) note: Cj1227c, probable two-component regulator, len: 224 aa; identical to TR:Q46095 (EMBL:U27271) C. jejuni CDS (called ompR) (198 aa), and similar to many e.g. YYCF_BACSU hypothetical 27.2 kd sensory transduction protein (235 aa), fasta scores; opt: 490 z-score: 561.1 E(): 5.9e-24, 36.4% identity in 225 aa overlap. No Hp ortholog. Contains Pfam match to entry PF00072 response_reg, Response regulator receiver domain, and Pfam match to entry PF00486 trans_reg_C,Transcriptional regulatory protein, C terminal. Also similar to Cj1261 (50.7% identity in 223 aa overlap); Upd [...] | 0.980 |
Cj0247c | Cj1492c | Cj0247c | Cj1492c | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Putative two-component sensor; Original (2000) note: Cj1492c, probable two-component sensor, len: 403 aa; similar to many e.g. KINC_BACSU sporulation kinase C (428 aa), fasta scores; opt: 281 z-score: 301.1 E(): 1.9e-09, 29.3% identity in 242 aa overlap. No Hp ortholog. Contains Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: No specific characterisation with acceptable identity score has been carried out yet,so putative kept within product function. Functional classification - Signal transduction. | 0.938 |
Cj0247c | cheA | Cj0247c | Cj0284c | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Chemotaxis histidine kinase; Original (2000) note: Cj0284c, cheA, probable chemotaxis histidine kinase, len: 769 aa; similar to many e.g. CHEA_ECOLI chemotaxis protein cheA (EC 2.7.3.-) (654 aa), fasta scores; opt: 1022 z-score: 1416.0 E(): 0, 35.7% identity in 658 aa overlap. 64.6% identity to HP0392. Contains Pfam matches to entry PF00072 response_reg,Response regulator receiver domain, score 103.80, E-value 3.4e-27 and to entry PF00512 signal, Signal carboxyl-terminal domain, score -12.30, E-value 0.00013; Updated (2006) note: Characterised within Escherichia coli with marginal iden [...] | 0.990 |
Cj0247c | cheV | Cj0247c | Cj0285c | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Chemotaxis protein; Original (2000) note: Cj0285c, cheV, probable chemotaxis protein cheV, len: 318 aa; similar to e.g. CHEV_BACSU chemotaxis cheV protein (EC 2.7.3.-) (303 aa),fasta scores; opt: 414 z-score: 344.9 E(): 5.9e-12, 28.2% identity in 309 aa overlap. 50.8% identity to HP0393. Contains Pfam match to entry PF00072 response_reg,Response regulator receiver domain, score 50.70, E-value 3.1e-11; Updated (2006) note: Pfam domain PF01584 CheW-like domain identified within CDS. Further support given to product function. Characterised within Bacillus subtilis with marginal identity s [...] | 0.994 |
Cj0247c | dccS | Cj0247c | Cj1222c | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Original (2000) note: Cj1222c, probable two-component sensor (histidine kinase), len: 396 aa; similar to many sensor proteins e.g. RSTB_ECOLI sensor protein RSTB (433 aa), fasta scores; opt: 226 z-score: 267.7 E(): 1.3e-07, 24.5% identity in 237 aa overlap. 28.5% identity to HP1364. Contains Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain, and two possible membrane spanning domains; Updated (2006) note: Pfam domains PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase motif and PF00512 His Kinase A (phosphoacceptor) domain were identified within CDS. Pros [...] | 0.938 |
Cj0247c | racS | Cj0247c | Cj1262 | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | Original (2000) note: Cj1262, racS, probable two-component sensor (histidine kinase), len: 411 aa; 99.5% identical to TR:O68796 (EMBL:AF053961) C. jejuni putative histidine protein kinase (fragment) (189 aa), and similar to e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fast scores; opt: 188 z-score: 217.1 E(): 8.5e-05, 24.4% identity in 242 aa overlap. N-term has 28.2% identity to HP0165, C-term has 37.9% identity to HP0164. Also similar to Cj1226c (31.3% identity in 412 aa overlap). Contains Pfam match to entry PF00512 signal,Signal carboxyl-terminal domain, and Pfam match [...] | 0.896 |
Cj0889c | Cj0247c | Cj0889c | Cj0247c | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | 0.938 |
Cj0889c | Cj1110c | Cj0889c | Cj1110c | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | Original (2000) note: Cj1110c, probable MCP-type signal transduction protein, len: 429 aa; similar to TR:O68016 (EMBL:AF010180) Agrobacterium tumefaciens plasmid pTiC58 MCPA (579 aa), fasta scores; opt: 749 z-score: 785.2 E(): 0, 34.5% identity in 496 aa overlap,and to many other proteins with MCP domains e.g. PILJ_PSEAE PILJ protein (682 aa), fasta scores; opt: 379 z-score: 399.1 E(): 6.3e-15, 26.9% identity in 443 aa overlap, and HLYB_VIBCH hemolysin secretion protein precursor (548 aa), fasta scores; opt: 357 z-score: 377.6 E(): 9.8e-14, 37.0% identity in 173 aa overlap. No Hp ortho [...] | 0.720 |
Cj0889c | Cj1226c | Cj0889c | Cj1226c | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | Original (2000) note: Cj1226c, probable two-component sensor (histidine kinase), len: 415 aa; similar to many sensor proteins e.g. CPXA_ECOLI sensor protein CPXA (457 aa), fasta scores; opt: 205 z-score: 241.7 E(): 3.7e-06, 25.2% identity in 270 aa overlap. No Hp ortholog. Contains Pfam match to entry PF00512 signal,Signal carboxyl-terminal domain, and two possible membrane spanning domains. Also similar to Cj1262 (31.0% identity in 410 aa overlap); Updated (2006) note: Pfam domains PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase motifs,PF00512 His Kinase A (phosphoacce [...] | 0.564 |
Cj0889c | Cj1227c | Cj0889c | Cj1227c | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | Original (2000) note: Cj1227c, probable two-component regulator, len: 224 aa; identical to TR:Q46095 (EMBL:U27271) C. jejuni CDS (called ompR) (198 aa), and similar to many e.g. YYCF_BACSU hypothetical 27.2 kd sensory transduction protein (235 aa), fasta scores; opt: 490 z-score: 561.1 E(): 5.9e-24, 36.4% identity in 225 aa overlap. No Hp ortholog. Contains Pfam match to entry PF00072 response_reg, Response regulator receiver domain, and Pfam match to entry PF00486 trans_reg_C,Transcriptional regulatory protein, C terminal. Also similar to Cj1261 (50.7% identity in 223 aa overlap); Upd [...] | 0.924 |
Cj0889c | Cj1492c | Cj0889c | Cj1492c | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | Putative two-component sensor; Original (2000) note: Cj1492c, probable two-component sensor, len: 403 aa; similar to many e.g. KINC_BACSU sporulation kinase C (428 aa), fasta scores; opt: 281 z-score: 301.1 E(): 1.9e-09, 29.3% identity in 242 aa overlap. No Hp ortholog. Contains Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: No specific characterisation with acceptable identity score has been carried out yet,so putative kept within product function. Functional classification - Signal transduction. | 0.710 |
Cj0889c | cheA | Cj0889c | Cj0284c | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | Chemotaxis histidine kinase; Original (2000) note: Cj0284c, cheA, probable chemotaxis histidine kinase, len: 769 aa; similar to many e.g. CHEA_ECOLI chemotaxis protein cheA (EC 2.7.3.-) (654 aa), fasta scores; opt: 1022 z-score: 1416.0 E(): 0, 35.7% identity in 658 aa overlap. 64.6% identity to HP0392. Contains Pfam matches to entry PF00072 response_reg,Response regulator receiver domain, score 103.80, E-value 3.4e-27 and to entry PF00512 signal, Signal carboxyl-terminal domain, score -12.30, E-value 0.00013; Updated (2006) note: Characterised within Escherichia coli with marginal iden [...] | 0.871 |
Cj0889c | cheV | Cj0889c | Cj0285c | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | Chemotaxis protein; Original (2000) note: Cj0285c, cheV, probable chemotaxis protein cheV, len: 318 aa; similar to e.g. CHEV_BACSU chemotaxis cheV protein (EC 2.7.3.-) (303 aa),fasta scores; opt: 414 z-score: 344.9 E(): 5.9e-12, 28.2% identity in 309 aa overlap. 50.8% identity to HP0393. Contains Pfam match to entry PF00072 response_reg,Response regulator receiver domain, score 50.70, E-value 3.1e-11; Updated (2006) note: Pfam domain PF01584 CheW-like domain identified within CDS. Further support given to product function. Characterised within Bacillus subtilis with marginal identity s [...] | 0.870 |
Cj0889c | racS | Cj0889c | Cj1262 | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | Original (2000) note: Cj1262, racS, probable two-component sensor (histidine kinase), len: 411 aa; 99.5% identical to TR:O68796 (EMBL:AF053961) C. jejuni putative histidine protein kinase (fragment) (189 aa), and similar to e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fast scores; opt: 188 z-score: 217.1 E(): 8.5e-05, 24.4% identity in 242 aa overlap. N-term has 28.2% identity to HP0165, C-term has 37.9% identity to HP0164. Also similar to Cj1226c (31.3% identity in 412 aa overlap). Contains Pfam match to entry PF00512 signal,Signal carboxyl-terminal domain, and Pfam match [...] | 0.621 |
Cj1110c | Cj0247c | Cj1110c | Cj0247c | Original (2000) note: Cj1110c, probable MCP-type signal transduction protein, len: 429 aa; similar to TR:O68016 (EMBL:AF010180) Agrobacterium tumefaciens plasmid pTiC58 MCPA (579 aa), fasta scores; opt: 749 z-score: 785.2 E(): 0, 34.5% identity in 496 aa overlap,and to many other proteins with MCP domains e.g. PILJ_PSEAE PILJ protein (682 aa), fasta scores; opt: 379 z-score: 399.1 E(): 6.3e-15, 26.9% identity in 443 aa overlap, and HLYB_VIBCH hemolysin secretion protein precursor (548 aa), fasta scores; opt: 357 z-score: 377.6 E(): 9.8e-14, 37.0% identity in 173 aa overlap. No Hp ortho [...] | Hypothetical protein Cj0247c; Original (2000) note: Cj0247c, unknown, len: 177 aa; no Hp match; Updated (2006) note: Similar to proteins from other bacteria. Functional classification - Unknown. | 0.932 |
Cj1110c | Cj0889c | Cj1110c | Cj0889c | Original (2000) note: Cj1110c, probable MCP-type signal transduction protein, len: 429 aa; similar to TR:O68016 (EMBL:AF010180) Agrobacterium tumefaciens plasmid pTiC58 MCPA (579 aa), fasta scores; opt: 749 z-score: 785.2 E(): 0, 34.5% identity in 496 aa overlap,and to many other proteins with MCP domains e.g. PILJ_PSEAE PILJ protein (682 aa), fasta scores; opt: 379 z-score: 399.1 E(): 6.3e-15, 26.9% identity in 443 aa overlap, and HLYB_VIBCH hemolysin secretion protein precursor (548 aa), fasta scores; opt: 357 z-score: 377.6 E(): 9.8e-14, 37.0% identity in 173 aa overlap. No Hp ortho [...] | Original (2000) note: Cj0889c, probable sensory transduction histidine kinase, len: 429 aa; similar in C-terminus to many e.g. ENVZ_ECOLI osmolarity sensor protein ENVZ (450 aa), fasta scores; opt: 210 z-score: 229.3 E(): 1.8e-05. 26.5% identity in 204 aa overlap No Hp ortholog. Contains two probable transmembrane domains in N-terminus and Pfam match to entry PF00512 signal, Signal carboxyl-terminal domain; Updated (2006) note: Pfam domain PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase identified within CDS. Further support given to product function. Some characterisat [...] | 0.720 |
Cj1110c | Cj1226c | Cj1110c | Cj1226c | Original (2000) note: Cj1110c, probable MCP-type signal transduction protein, len: 429 aa; similar to TR:O68016 (EMBL:AF010180) Agrobacterium tumefaciens plasmid pTiC58 MCPA (579 aa), fasta scores; opt: 749 z-score: 785.2 E(): 0, 34.5% identity in 496 aa overlap,and to many other proteins with MCP domains e.g. PILJ_PSEAE PILJ protein (682 aa), fasta scores; opt: 379 z-score: 399.1 E(): 6.3e-15, 26.9% identity in 443 aa overlap, and HLYB_VIBCH hemolysin secretion protein precursor (548 aa), fasta scores; opt: 357 z-score: 377.6 E(): 9.8e-14, 37.0% identity in 173 aa overlap. No Hp ortho [...] | Original (2000) note: Cj1226c, probable two-component sensor (histidine kinase), len: 415 aa; similar to many sensor proteins e.g. CPXA_ECOLI sensor protein CPXA (457 aa), fasta scores; opt: 205 z-score: 241.7 E(): 3.7e-06, 25.2% identity in 270 aa overlap. No Hp ortholog. Contains Pfam match to entry PF00512 signal,Signal carboxyl-terminal domain, and two possible membrane spanning domains. Also similar to Cj1262 (31.0% identity in 410 aa overlap); Updated (2006) note: Pfam domains PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase motifs,PF00512 His Kinase A (phosphoacce [...] | 0.720 |