STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166625_02938Unannotated protein. (465 aa)    
Predicted Functional Partners:
GCA_900166625_02939
Unannotated protein.
 
 
 0.999
GCA_900166625_02940
Unannotated protein.
 
 
 0.999
GCA_900166625_00615
Unannotated protein.
 
 
 0.882
GCA_900166625_01458
Unannotated protein.
  
    0.739
GCA_900166625_01935
Unannotated protein.
    
 0.734
GCA_900166625_01839
Unannotated protein.
 
 
 0.695
GCA_900166625_01154
Unannotated protein.
  
 
 0.656
GCA_900166625_01409
Unannotated protein.
    
  0.644
GCA_900166625_03464
Unannotated protein.
     
 0.609
GCA_900166625_00524
Unannotated protein.
  
  
 0.549
Your Current Organism:
Halobacillus massiliensis
NCBI taxonomy Id: 1926286
Other names: CSUR P3554, H. massiliensis, Halobacillus sp. Marseille-P3554, P3554, strain Marseille-P3554
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.