STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28450.1Stage III sporulation protein AC. (68 aa)    
Predicted Functional Partners:
GAW28448.1
Stage III sporulation protein AE.
 
  
 0.988
GAW28449.1
Stage III sporulation protein AD.
 
  
 0.987
GAW28451.1
Stage III sporulation protein AB.
 
  
 0.981
GAW28447.1
Sporulation stage III protein AF.
 
  
 0.968
GAW28452.1
Stage III sporulation protein AA.
 
  
 0.963
GAW28446.1
Stage III sporulation protein AG.
 
  
 0.906
GAW28445.1
Hypothetical protein.
 
  
 0.861
GAW27850.1
Stage II sporulation protein M.
  
  
 0.827
GAW27463.1
Hypothetical protein.
  
  
 0.704
GAW28784.1
sigma-E processing peptidase SpoIIGA.
  
    0.673
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.