STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28566.1ABC transporter. (298 aa)    
Predicted Functional Partners:
GAW29031.1
Transporter.
 
 
 0.973
GAW28565.1
GntR family transcriptional regulator.
 
  
 0.957
GAW28347.1
Multidrug ABC transporter permease.
 
 
 0.921
GAW29548.1
Amino acid ABC transporter ATPase.
 
   
 
0.905
GAW28819.1
ABC transporter ATP-binding protein.
 
  
 
0.840
GAW28568.1
Hypothetical protein.
 
     0.790
GAW29273.1
Hypothetical protein.
  
  
  0.780
GAW29275.1
Phosphonate ABC transporter, permease protein PhnE.
  
  
  0.769
GAW30107.1
Hypothetical protein.
  
 
 0.734
GAW29463.1
ABC transporter.
    
 0.729
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.