STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29108.1Cobalamin biosynthesis protein CbiM. (224 aa)    
Predicted Functional Partners:
GAW29105.1
Hypothetical protein.
 
 0.996
GAW27741.1
Cobalt ECF transporter T component CbiQ.
 
 0.995
GAW29104.1
Cobalt ABC transporter ATPase.
 
 0.994
GAW29107.1
Hypothetical protein.
 
  
  0.980
GAW27742.1
Cobalt/nickel transport system ATP-binding protein.
 
 0.978
GAW27740.1
Cobalamin biosynthesis protein CbiN.
 
 
 0.957
GAW29106.1
RNA-binding protein.
       0.779
GAW29113.1
Methyl-accepting chemotaxis sensory transducer.
    
  0.693
GAW28067.1
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase.
 
    0.688
GAW27751.1
ABC transporter.
    
  0.625
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.