STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29365.1NitT/TauT family transport system ATP-binding protein. (273 aa)    
Predicted Functional Partners:
GAW29364.1
ABC transporter permease.
 
 0.998
GAW29363.1
Aliphatic sulfonates family ABC transporter substrate-binding protein.
 
 
 0.997
GAW27796.1
Hypothetical protein.
 
  0.969
GAW28505.1
Molybdate transport system permease protein.
  
 0.962
GAW28669.1
Hypothetical protein.
  
 
 0.925
GAW28333.1
ABC transporter permease.
 
      0.900
GAW29316.1
Glutamine ABC transporter permease.
 
   
  0.890
GAW30107.1
Hypothetical protein.
    
 0.889
GAW27795.1
Hypothetical protein.
 
  
 
0.850
GAW29551.1
Glutamine abc transporter, glutamine-binding protein, putative.
 
   
  0.832
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.