STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW30180.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
GAW27577.1
50S ribosomal protein L18.
   
   0.979
GAW27563.1
50S ribosomal protein L23.
   
 
 0.977
GAW27569.1
50S ribosomal protein L29.
   
   0.973
GAW27571.1
50S ribosomal protein L14.
   
   0.973
GAW27573.1
50S ribosomal protein L5.
   
   0.973
GAW27579.1
50S ribosomal protein L30.
   
   0.973
GAW27566.1
50S ribosomal protein L22.
   
 
 0.972
GAW27576.1
50S ribosomal protein L6.
   
   0.970
GAW27591.1
50S ribosomal protein L13.
   
   0.969
GAW27572.1
50S ribosomal protein L24.
   
   0.958
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.